WormBase Tree Display for Variation: WBVar01577853
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WBVar01577853 | Name | Public_name | WBVar01577853 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00192425 | |||||||
T12B5.6b.1:c.663C>T | ||||||||
T12B5.6c.1:c.576C>T | ||||||||
CE39403:p.Val221= | ||||||||
CE51680:p.Val192= | ||||||||
HGVSg | CHROMOSOME_III:g.933917G>A | |||||||
Sequence_details | SMap | S_parent | Sequence | T12B5 | ||||
Flanking_sequences | AATATAAAAGCATTTGAAATGGAAAAAATG | ACAATGGCATTCGTACACTCAACTCTACGA | ||||||
Mapping_target | T12B5 | |||||||
Source_location | 225 | CHROMOSOME_III | 933906 | 933906 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00020453 | ||||||
Transcript | T12B5.6c.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | T12B5.6c.1:c.576C>T | |||||||
HGVSp | CE51680:p.Val192= | |||||||
cDNA_position | 594 | |||||||
CDS_position | 576 | |||||||
Protein_position | 192 | |||||||
Exon_number | 3/5 | |||||||
Codon_change | gtC/gtT | |||||||
Amino_acid_change | V | |||||||
T12B5.6b.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | T12B5.6b.1:c.663C>T | |||||||
HGVSp | CE39403:p.Val221= | |||||||
cDNA_position | 683 | |||||||
CDS_position | 663 | |||||||
Protein_position | 221 | |||||||
Exon_number | 3/5 | |||||||
Codon_change | gtC/gtT | |||||||
Amino_acid_change | V | |||||||
Method | WGS_Flibotte |