WormBase Tree Display for Variation: WBVar01552052
expand all nodes | collapse all nodes | view schema
WBVar01552052 | Name | Public_name | WBVar01552052 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00129158 | |||||||
F31B12.1a.1:c.5637A>C | ||||||||
CE28227:p.Pro1879= | ||||||||
F31B12.1c.1:c.5550+500A>C | ||||||||
HGVSg | CHROMOSOME_X:g.10796010T>G | |||||||
Sequence_details | SMap | S_parent | Sequence | T05A10 | ||||
Flanking_sequences | GTATATCATATAATAAGTTTCGTCCTTTTT | GGAATACCCTCACGAATGATTTTTGCCATT | ||||||
Mapping_target | T05A10 | |||||||
Source_location | 225 | CHROMOSOME_X | 10795945 | 10795945 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | G | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain (18) | ||||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00004036 | ||||||
Transcript | F31B12.1a.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | F31B12.1a.1:c.5637A>C | |||||||
HGVSp | CE28227:p.Pro1879= | |||||||
cDNA_position | 5675 | |||||||
CDS_position | 5637 | |||||||
Protein_position | 1879 | |||||||
Exon_number | 33/34 | |||||||
Codon_change | ccA/ccC | |||||||
Amino_acid_change | P | |||||||
F31B12.1c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F31B12.1c.1:c.5550+500A>C | |||||||
Intron_number | 31/32 | |||||||
Method | WGS_Flibotte |