WormBase Tree Display for Variation: WBVar01465018
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WBVar01465018 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01465018 | ||||
Other_name | Y59A8B.14b.1:c.678-73A>T | |||||
Y59A8B.14a.1:c.1101-73A>T | ||||||
Y59A8B.14c.1:c.1089-73A>T | ||||||
HGVSg | CHROMOSOME_V:g.18104133A>T | |||||
Sequence_details | SMap | S_parent | Sequence | Y59A8B | ||
Flanking_sequences | AAAAATAATATTTCTGAATTCTTTTCAAAC | TTTTTTTTAATTTGGAAAAAAGTTATTTAA | ||||
Mapping_target | Y59A8B | |||||
Type_of_mutation | Substitution | a | t | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00023228 | From_analysis | WGS_Andersen | |||
WBStrain00023266 | From_analysis | WGS_Andersen | ||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | WGS_Andersen | |||||
DB_info | Database | dbSNP_rs | rs | 193350674 | ||
dbSNP_ss | ss | 295526593 | ||||
Status | Live | |||||
Affects | Gene | WBGene00003919 | ||||
Transcript | Y59A8B.14a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | Y59A8B.14a.1:c.1101-73A>T | |||||
Intron_number | 7/10 | |||||
Y59A8B.14b.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y59A8B.14b.1:c.678-73A>T | |||||
Intron_number | 4/7 | |||||
Y59A8B.14c.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y59A8B.14c.1:c.1089-73A>T | |||||
Intron_number | 7/10 | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |