WormBase Tree Display for Variation: WBVar01449382
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WBVar01449382 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01449382 | ||||
Other_name | Y49E10.19.2:c.-84C>T | |||||
HGVSg | CHROMOSOME_III:g.12453316G>A | |||||
Sequence_details | SMap | S_parent | Sequence | Y49E10 | ||
Flanking_sequences | CAGCTTTTCTTGTAGAAAATAATTAAAATT | ACTAATACGCGTTTATATCGGGCAAAATTC | ||||
Mapping_target | Y49E10 | |||||
Type_of_mutation | Substitution | g | a | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00004601 | From_analysis | WGS_Andersen | |||
WBStrain00005834 | From_analysis | WGS_Andersen | ||||
WBStrain00030546 | From_analysis | WGS_Andersen | ||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | WGS_Andersen | |||||
DB_info | Database | dbSNP_rs | rs | 193335236 | ||
dbSNP_ss | ss | 295511155 | ||||
Status | Live | |||||
Affects | Gene | WBGene00013038 | ||||
Transcript | Y49E10.19.2 | VEP_consequence | 5_prime_UTR_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | Y49E10.19.2:c.-84C>T | |||||
cDNA_position | 60 | |||||
Exon_number | 1/11 | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |