WormBase Tree Display for Variation: WBVar01439785
expand all nodes | collapse all nodes | view schema
WBVar01439785 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01439785 | ||||
Other_name | F45E10.1g.1:c.149-1048C>A | |||||
F45E10.1c.1:c.149-1048C>A | ||||||
F45E10.1a.1:c.149-1048C>A | ||||||
F45E10.1b.1:c.149-1048C>A | ||||||
F45E10.1h.1:c.149-1048C>A | ||||||
HGVSg | CHROMOSOME_II:g.11081588G>T | |||||
Sequence_details | SMap | S_parent | Sequence | C09H10 | ||
Flanking_sequences | CTTCGACAAGACACAAAAAAAAAACGAGAA | TGATTGCGATCCAATTGGTCCGGCGAATTT | ||||
Mapping_target | C09H10 | |||||
Type_of_mutation | Substitution | g | t | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00031279 | From_analysis | WGS_Andersen | |||
WBStrain00031284 | From_analysis | WGS_Andersen | ||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | WGS_Andersen | |||||
DB_info | Database | dbSNP_rs | rs | 193327818 | ||
dbSNP_ss | ss | 295503737 | ||||
Status | Live | |||||
Affects | Gene | WBGene00006788 | ||||
Transcript | F45E10.1c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | F45E10.1c.1:c.149-1048C>A | |||||
Intron_number | 2/23 | |||||
F45E10.1b.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | F45E10.1b.1:c.149-1048C>A | |||||
Intron_number | 2/22 | |||||
F45E10.1g.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | F45E10.1g.1:c.149-1048C>A | |||||
Intron_number | 2/21 | |||||
F45E10.1a.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | F45E10.1a.1:c.149-1048C>A | |||||
Intron_number | 3/23 | |||||
F45E10.1h.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | F45E10.1h.1:c.149-1048C>A | |||||
Intron_number | 2/21 | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |