Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Variation: WBVar01439785

expand all nodes | collapse all nodes | view schema

Name Class

WBVar01439785EvidencePaper_evidenceWBPaper00040707
NamePublic_nameWBVar01439785
Other_nameF45E10.1g.1:c.149-1048C>A
F45E10.1c.1:c.149-1048C>A
F45E10.1a.1:c.149-1048C>A
F45E10.1b.1:c.149-1048C>A
F45E10.1h.1:c.149-1048C>A
HGVSgCHROMOSOME_II:g.11081588G>T
Sequence_detailsSMapS_parentSequenceC09H10
Flanking_sequencesCTTCGACAAGACACAAAAAAAAAACGAGAATGATTGCGATCCAATTGGTCCGGCGAATTT
Mapping_targetC09H10
Type_of_mutationSubstitutiongt
SeqStatusSequenced
Variation_typeSNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00031279From_analysisWGS_Andersen
WBStrain00031284From_analysisWGS_Andersen
LaboratoryQX
PersonWBPerson1730
AnalysisWGS_Andersen
DB_infoDatabasedbSNP_rsrs193327818
dbSNP_ssss295503737
StatusLive
AffectsGeneWBGene00006788
TranscriptF45E10.1c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF45E10.1c.1:c.149-1048C>A
Intron_number2/23
F45E10.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF45E10.1b.1:c.149-1048C>A
Intron_number2/22
F45E10.1g.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF45E10.1g.1:c.149-1048C>A
Intron_number2/21
F45E10.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF45E10.1a.1:c.149-1048C>A
Intron_number3/23
F45E10.1h.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF45E10.1h.1:c.149-1048C>A
Intron_number2/21
ReferenceWBPaper00040707
MethodWGS_Andersen