WormBase Tree Display for Variation: WBVar01414233
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WBVar01414233 | Evidence | Paper_evidence | WBPaper00037807 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01414233 | ||||
Other_name | cewivar00679594 | |||||
Y54E10BR.4b.1:c.753-736del | ||||||
Y54E10BR.4a.1:c.1005-736del | ||||||
HGVSg | CHROMOSOME_I:g.3020596del | |||||
Sequence_details | SMap | S_parent | Sequence | Y54E10BR | ||
Flanking_sequences | CCGAATATAACAGTGAAAAAATTTATAAAATTTTTCTAAGTTTTTTATGA | TTTTTTTTTTTGGTTTTTTTGAAAAAATTGAAAAAGGGCCAAATTAAATT | ||||
Mapping_target | Y54E10BR | |||||
Type_of_mutation | Deletion | T | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||
WGS_De_Bono | ||||||
Laboratory | AX | |||||
Analysis | WGS_De_Bono | |||||
Million_mutation_project_reanalysis | ||||||
DB_info | Database | dbSNP_ss | ss | 539068946 | ||
Status | Live | |||||
Affects | Gene | WBGene00021843 | ||||
Transcript | Y54E10BR.4a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | Y54E10BR.4a.1:c.1005-736del | |||||
Intron_number | 4/5 | |||||
Y54E10BR.4b.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y54E10BR.4b.1:c.753-736del | |||||
Intron_number | 2/2 | |||||
Reference | WBPaper00037807 | |||||
Method | WGS_De_Bono |