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WormBase Tree Display for Variation: WBVar01399971

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Name Class

WBVar01399971EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar01399971
Other_namecewivar00633187
F53C3.13d.1:c.956+76_956+78del
F53C3.13f.1:c.962+76_962+78del
F53C3.13d.2:c.956+76_956+78del
F53C3.13c.1:c.956+76_956+78del
F53C3.13b.1:c.956+76_956+78del
F53C3.13a.1:c.956+76_956+78del
F53C3.13e.1:c.956+76_956+78del
HGVSgCHROMOSOME_II:g.3924383_3924385del
Sequence_detailsSMapS_parentSequenceF53C3
Flanking_sequencesGATTTTTTTCGATAAGTTCTGACAATCGGACAAAGCGTGAGAGAGAGGTGGTAGTAGTAGTAGTAGTAGGCTGCCGGCGGAGAATTTTTTGACTTTTTCA
Mapping_targetF53C3
Type_of_mutationDeletionGTAPaper_evidenceWBPaper00037807
SeqStatusSequenced
Variation_typeSNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (12)
LaboratoryAX
AnalysisWGS_De_Bono
Million_mutation_project_reanalysis
DB_infoDatabasedbSNP_ssss539194996
StatusLive
AffectsGeneWBGene00018756
TranscriptF53C3.13e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53C3.13e.1:c.956+76_956+78del
Intron_number5/6
F53C3.13b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53C3.13b.1:c.956+76_956+78del
Intron_number5/6
F53C3.13d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53C3.13d.1:c.956+76_956+78del
Intron_number5/7
F53C3.13a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53C3.13a.1:c.956+76_956+78del
Intron_number5/6
F53C3.13d.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53C3.13d.2:c.956+76_956+78del
Intron_number5/6
F53C3.13f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53C3.13f.1:c.962+76_962+78del
Intron_number5/6
F53C3.13c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53C3.13c.1:c.956+76_956+78del
Intron_number5/6
ReferenceWBPaper00037807
MethodWGS_De_Bono