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WormBase Tree Display for Variation: WBVar01393732

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Name Class

WBVar01393732EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar01393732
Other_namecewivar00670968
F22D3.2e.1:c.1159-382_1159-381del
F22D3.2g.1:c.1168-370_1168-369del
F22D3.2d.1:c.1168-382_1168-381del
F22D3.2c.1:c.-5_-4del
F22D3.2j.1:c.1159-370_1159-369del
HGVSgCHROMOSOME_II:g.6944356_6944357del
Sequence_detailsSMapS_parentSequenceF22D3
Flanking_sequencesAAACTTGCACGCAGTAGACCGATTCAATATCCCGGTACAATATCAACTGAAGTATGTGTATTGCTTCTGTATCATCATCTGTGGCTATTCAAAACGAAAA
Mapping_targetF22D3
Type_of_mutationDeletionAGPaper_evidenceWBPaper00037807
SeqStatusSequenced
Variation_typeSNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (17)
LaboratoryAX
AnalysisWGS_De_Bono
Million_mutation_project_reanalysis
DB_infoDatabasedbSNP_ssss539113155
StatusLive
AffectsGeneWBGene00017699
TranscriptF22D3.2g.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF22D3.2g.1:c.1168-370_1168-369del
Intron_number14/18
F22D3.2e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF22D3.2e.1:c.1159-382_1159-381del
Intron_number14/18
F22D3.2c.1VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScF22D3.2c.1:c.-5_-4del
cDNA_position52-53
Exon_number1/7
F22D3.2d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF22D3.2d.1:c.1168-382_1168-381del
Intron_number14/18
F22D3.2j.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF22D3.2j.1:c.1159-370_1159-369del
Intron_number14/18
ReferenceWBPaper00037807
MethodWGS_De_Bono