WormBase Tree Display for Variation: WBVar01369322
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| WBVar01369322 | Evidence | Paper_evidence | WBPaper00037807 | |||
|---|---|---|---|---|---|---|
| Name | Public_name | WBVar01369322 | ||||
| Other_name | cewivar00684577 | |||||
| F53C3.13a.1:c.849-135dup | ||||||
| F53C3.13f.1:c.855-135dup | ||||||
| F53C3.13c.1:c.849-135dup | ||||||
| F53C3.13e.1:c.849-135dup | ||||||
| F53C3.13d.2:c.849-135dup | ||||||
| F53C3.13d.1:c.849-135dup | ||||||
| F53C3.13b.1:c.849-135dup | ||||||
| HGVSg | CHROMOSOME_II:g.3924702_3924703insT | |||||
| Sequence_details | SMap | S_parent | Sequence | F53C3 | ||
| Flanking_sequences | TTAAAAAAAAAGACACACATTTTCTGAAAAACTGAAAAAAAAAGTTATAC | TTTTTTTTTATTTTACGAAAAGTAAATTGTCAAAATATTGATTTTCTTCA | ||||
| Mapping_target | F53C3 | |||||
| Type_of_mutation | Insertion | T | Paper_evidence | WBPaper00037807 | ||
| SeqStatus | Sequenced | |||||
| Variation_type | SNP | |||||
| Natural_variant | ||||||
| Origin | Species | Caenorhabditis elegans | ||||
| Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | |||
| Million_mutation_project_reanalysis | ||||||
| WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | ||||
| WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | ||||
| WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | ||||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | ||||
| WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | ||||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | ||||
| Laboratory | AX | |||||
| Analysis | WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | ||||||
| DB_info | Database | dbSNP_ss | ss | 539044724 | ||
| History | Acquires_merge | WBVar01959814 | ||||
| Status | Live | |||||
| Affects | Gene | WBGene00018756 | ||||
| Transcript | F53C3.13e.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | |||||
| HGVSc | F53C3.13e.1:c.849-135dup | |||||
| Intron_number | 4/6 | |||||
| F53C3.13b.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F53C3.13b.1:c.849-135dup | |||||
| Intron_number | 4/6 | |||||
| F53C3.13d.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F53C3.13d.1:c.849-135dup | |||||
| Intron_number | 4/7 | |||||
| F53C3.13a.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F53C3.13a.1:c.849-135dup | |||||
| Intron_number | 4/6 | |||||
| F53C3.13d.2 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F53C3.13d.2:c.849-135dup | |||||
| Intron_number | 4/6 | |||||
| F53C3.13f.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F53C3.13f.1:c.855-135dup | |||||
| Intron_number | 4/6 | |||||
| F53C3.13c.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F53C3.13c.1:c.849-135dup | |||||
| Intron_number | 4/6 | |||||
| Reference | WBPaper00037807 | |||||
| Method | WGS_De_Bono |
