WormBase Tree Display for Variation: WBVar01337719
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WBVar01337719 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01337719 | |||||
Other_name | cewivar00153251 | ||||||
Y49E10.19.2:c.843+252A>T | |||||||
Y49E10.19.1:c.843+252A>T | |||||||
HGVSg | CHROMOSOME_III:g.12452025T>A | ||||||
Sequence_details | SMap | S_parent | Sequence | Y49E10 | |||
Flanking_sequences | AAAAACTGAGATTTTTTCAATTTTCAAAAAATCATATAAAACCTAGAAAA | TTTTTTATTATGATATTCGGTCATTGTGACCCCATAGGCGGGTTTAAAGC | |||||
Mapping_target | Y49E10 | ||||||
Type_of_mutation | Substitution | t | A | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||||
WGS_De_Bono | |||||||
WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | AX | ||||||
Analysis | WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | |||||||
DB_info | Database | dbSNP_ss | ss | 539192227 | |||
Status | Live | ||||||
Affects | Gene | WBGene00013038 | |||||
Transcript | Y49E10.19.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | ||||||
HGVSc | Y49E10.19.1:c.843+252A>T | ||||||
Intron_number | 3/9 | ||||||
Y49E10.19.2 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | Y49E10.19.2:c.843+252A>T | ||||||
Intron_number | 4/10 | ||||||
Reference | WBPaper00037807 | ||||||
Method | WGS_De_Bono |