WormBase Tree Display for Variation: WBVar01322844

WBVar01322844 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar01322844
    Other_name: cewivar00397465
      T12B5.9:n.828C>G
      T12B5.8.2:c.114-244C>G
      T12B5.8.1:c.114-244C>G
    HGVSg: CHROMOSOME_III:g.942001G>C
  Sequence_details: SMap: S_parent: Sequence: T12B5
    Flanking_sequences: CTATTGGGAGGATCGTCGACCCTCTTCTTCCAGAACGCGGGCGAGCGCGA TCGAAGAAGTCGTTCACTGCCTTTTCGAGGTCCTCAAACTTTGCAAACTT
    Mapping_target: T12B5
    Type_of_mutation: Substitution: g C Paper_evidence: WBPaper00037807
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00008273 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022850 From_analysis: WGS_De_Bono
      WBStrain00023138 From_analysis: Million_mutation_project_reanalysis
      WBStrain00031113 From_analysis: Million_mutation_project_reanalysis
    Laboratory: AX
    Analysis: WGS_De_Bono
      Million_mutation_project_reanalysis
    DB_info: Database: dbSNP_ss ss 539178839
    Status: Live
  Affects: Gene: WBGene00023345
      WBGene00020455
    Transcript: T12B5.8.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T12B5.8.2:c.114-244C>G
        Intron_number: 2/6
      T12B5.8.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T12B5.8.1:c.114-244C>G
        Intron_number: 2/5
    Pseudogene: T12B5.9 VEP_consequence: non_coding_transcript_exon_variant
        VEP_impact: MODIFIER
        HGVSc: T12B5.9:n.828C>G
        cDNA_position: 828
        Exon_number: 7/7
  Reference: WBPaper00037807
  Method: WGS_De_Bono