WormBase Tree Display for Variation: WBVar01318237
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WBVar01318237 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01318237 | |||||
Other_name | cewivar00510566 | ||||||
CE19779:p.Lys177= | |||||||
F08G2.7.1:c.531G>A | |||||||
HGVSg | CHROMOSOME_II:g.13838437C>T | ||||||
Sequence_details | SMap | S_parent | Sequence | F08G2 | |||
Flanking_sequences | TCGTAGTGAGCTCGAATTTTCTTCTTCAAATCCTGATATCTCATCGATTT | TTATAGACCTCCTCTTCATCCTCCTCCTCGTCCTCCTCCTCTTCCGGATG | |||||
Mapping_target | F08G2 | ||||||
Type_of_mutation | Substitution | c | T | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | ||||
WGS_De_Bono | |||||||
Laboratory | AX | ||||||
Analysis | WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | |||||||
DB_info | Database | dbSNP_ss | ss | 539174695 | |||
Status | Live | ||||||
Affects | Gene | WBGene00008578 | |||||
Transcript | F08G2.7.1 | VEP_consequence | synonymous_variant | ||||
VEP_impact | LOW | ||||||
HGVSc | F08G2.7.1:c.531G>A | ||||||
HGVSp | CE19779:p.Lys177= | ||||||
cDNA_position | 618 | ||||||
CDS_position | 531 | ||||||
Protein_position | 177 | ||||||
Exon_number | 4/7 | ||||||
Codon_change | aaG/aaA | ||||||
Amino_acid_change | K | ||||||
Reference | WBPaper00037807 | ||||||
Method | WGS_De_Bono |