WormBase Tree Display for Variation: WBVar01281858
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WBVar01281858 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01281858 | |||||
Other_name | cewivar00505526 | ||||||
ZK973.6c.1:c.1931C>T | |||||||
CE52179:p.Ala644Val | |||||||
ZK973.6a.1:c.1952C>T | |||||||
CE33588:p.Ala651Val | |||||||
HGVSg | CHROMOSOME_I:g.4327104C>T | ||||||
Sequence_details | SMap | S_parent | Sequence | ZK973 | |||
Flanking_sequences | ACGACGTAGAAACGGAGTTCCACCGACTCCGGAAGACGAACAAGCACTTG | TGTTATCACTGCTGGAGCCGATCAGTTGGCTCCAAAGTTGGGAGCTTCTG | |||||
Mapping_target | ZK973 | ||||||
Type_of_mutation | Substitution | c | T | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | ||||
WGS_De_Bono | |||||||
Laboratory | AX | ||||||
Analysis | WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | |||||||
DB_info | Database | dbSNP_ss | ss | 539141952 | |||
Status | Live | ||||||
Affects | Gene | WBGene00000140 | |||||
Transcript | ZK973.6c.1 | VEP_consequence | missense_variant | ||||
VEP_impact | MODERATE | ||||||
HGVSc | ZK973.6c.1:c.1931C>T | ||||||
HGVSp | CE52179:p.Ala644Val | ||||||
cDNA_position | 1931 | ||||||
CDS_position | 1931 | ||||||
Protein_position | 644 | ||||||
Exon_number | 8/30 | ||||||
Codon_change | gCt/gTt | ||||||
Amino_acid_change | A/V | ||||||
ZK973.6a.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | ||||||
HGVSc | ZK973.6a.1:c.1952C>T | ||||||
HGVSp | CE33588:p.Ala651Val | ||||||
cDNA_position | 1952 | ||||||
CDS_position | 1952 | ||||||
Protein_position | 651 | ||||||
Exon_number | 8/31 | ||||||
Codon_change | gCt/gTt | ||||||
Amino_acid_change | A/V | ||||||
Reference | WBPaper00037807 | ||||||
Method | WGS_De_Bono |