WormBase Tree Display for Variation: WBVar01281800
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WBVar01281800 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01281800 | |||||
Other_name | cewivar00505493 | ||||||
Y47D9A.2a.1:c.-289C>G | |||||||
HGVSg | CHROMOSOME_I:g.4298337C>G | ||||||
Sequence_details | SMap | S_parent | Sequence | Y47D9A | |||
Flanking_sequences | TCTACTTCTGCAGCAACAACATAGCAAAAGAAAGAAAGAGAGAGAAAAGT | TTTTGGGGAGCTCACTCACTCTCTTCTCTCATTTTCCTTCCTCTTCTTCT | |||||
Mapping_target | Y47D9A | ||||||
Type_of_mutation | Substitution | c | G | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | ||||
WGS_De_Bono | |||||||
Laboratory | AX | ||||||
Analysis | WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | |||||||
DB_info | Database | dbSNP_ss | ss | 539141900 | |||
Status | Live | ||||||
Affects | Gene | WBGene00021629 | |||||
Transcript | Y47D9A.2a.1 | VEP_consequence | 5_prime_UTR_variant | ||||
VEP_impact | MODIFIER | ||||||
HGVSc | Y47D9A.2a.1:c.-289C>G | ||||||
cDNA_position | 154 | ||||||
Exon_number | 1/6 | ||||||
Reference | WBPaper00037807 | ||||||
Method | WGS_De_Bono |