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WormBase Tree Display for Variation: WBVar01279881

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Name Class

WBVar01279881EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar01279881
Other_namecewivar00490571
Y23H5A.5d.1:c.*77-433A>C
Y23H5A.5d.2:c.*1-433A>C
Y23H5A.5d.3:c.*142-433A>C
Y23H5A.5a.1:c.2421-433A>C
HGVSgCHROMOSOME_I:g.2616658A>C
Sequence_detailsSMapS_parentSequenceY23H5A
Flanking_sequencesACAAGAAGCAGGTAGGCAGGCATTGGATAGGCAAGTAGGTAGGTATAGAACAAGCATGTGCAAGCCAGACGGAAACTTAATGAAACTACATGGAGTAGGT
Mapping_targetY23H5A
Type_of_mutationSubstitutionaCPaper_evidenceWBPaper00037807
SeqStatusSequenced
Variation_typeSNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00022850From_analysisMillion_mutation_project_reanalysis
WGS_De_Bono
WBStrain00022886From_analysisMillion_mutation_project_reanalysis
WBStrain00023286From_analysisMillion_mutation_project_reanalysis
LaboratoryAX
AnalysisWGS_De_Bono
Million_mutation_project_reanalysis
DB_infoDatabasedbSNP_ssss539140173
StatusLive
AffectsGeneWBGene00000832
TranscriptY23H5A.5d.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY23H5A.5d.3:c.*142-433A>C
Intron_number15/15
Y23H5A.5d.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY23H5A.5d.2:c.*1-433A>C
Intron_number14/14
Y23H5A.5a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY23H5A.5a.1:c.2421-433A>C
Intron_number14/15
Y23H5A.5d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY23H5A.5d.1:c.*77-433A>C
Intron_number15/15
ReferenceWBPaper00037807
MethodWGS_De_Bono