WormBase Tree Display for Variation: WBVar01255526

WBVar01255526 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar01255526
    Other_name: cewivar00283785
      T12B5.8.2:c.114-497G>A
      T12B5.9:n.579G>A
      T12B5.8.1:c.114-497G>A
    HGVSg: CHROMOSOME_III:g.942254C>T
  Sequence_details: SMap: S_parent: Sequence: T12B5
    Flanking_sequences: ACCGCGAAGTGTATTGGGTGCTTTTCTTGGACTGCAAGAGCGAGCGAGTT AGCTGATCAGAAAAGGTGGAAGCCGTGATTGTTCTGTCTTGCGGAAGCAA
    Mapping_target: T12B5
    Type_of_mutation: Substitution: c T Paper_evidence: WBPaper00037807
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00006622 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006640 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006642 From_analysis: WGS_De_Bono
      WBStrain00006643 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006645 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022852 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022878 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027647 From_analysis: Million_mutation_project_reanalysis
    Laboratory: AX
    Analysis: WGS_De_Bono
      Million_mutation_project_reanalysis
    DB_info: Database: dbSNP_ss ss 539091917
    Status: Live
  Affects: Gene: WBGene00023345
      WBGene00020455
    Transcript: T12B5.8.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T12B5.8.2:c.114-497G>A
        Intron_number: 2/6
      T12B5.8.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T12B5.8.1:c.114-497G>A
        Intron_number: 2/5
    Pseudogene: T12B5.9 VEP_consequence: non_coding_transcript_exon_variant
        VEP_impact: MODIFIER
        HGVSc: T12B5.9:n.579G>A
        cDNA_position: 579
        Exon_number: 5/7
  Reference: WBPaper00037807
  Method: WGS_De_Bono