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WormBase Tree Display for Variation: WBVar01254673

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Name Class

WBVar01254673EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar01254673
Other_namecewivar00655579
F45E10.1d.1:c.-122-719del
F45E10.1a.1:c.281-719del
F45E10.1b.1:c.281-719del
F45E10.1h.1:c.281-719del
F45E10.1g.1:c.281-719del
F45E10.1c.1:c.281-719del
HGVSgCHROMOSOME_II:g.11074600del
Sequence_detailsSMapS_parentSequenceC09H10
Flanking_sequencesTGTGTTCTTTTTTCCACAAAAAAGTATCGCCTCTACACTGAATCGAAACCTTTTTTGGTGTGGTTCTTTCGATTTGATTCGTTGACTATTAGTTCAGTTC
Mapping_targetC09H10
Type_of_mutationDeletionTPaper_evidenceWBPaper00037807
SeqStatusSequenced
Variation_typeSNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (19)
LaboratoryAX
AnalysisWGS_De_Bono
Million_mutation_project_reanalysis
DB_infoDatabasedbSNP_ssss539007104
StatusLive
AffectsGeneWBGene00006788
TranscriptF45E10.1c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF45E10.1c.1:c.281-719del
Intron_number4/23
F45E10.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF45E10.1b.1:c.281-719del
Intron_number4/22
F45E10.1d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF45E10.1d.1:c.-122-719del
Intron_number1/20
F45E10.1g.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF45E10.1g.1:c.281-719del
Intron_number4/21
F45E10.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF45E10.1a.1:c.281-719del
Intron_number5/23
F45E10.1h.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF45E10.1h.1:c.281-719del
Intron_number4/21
ReferenceWBPaper00037807
MethodWGS_De_Bono