WormBase Tree Display for Variation: WBVar01254673
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WBVar01254673 | Evidence | Paper_evidence | WBPaper00037807 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01254673 | ||||
Other_name | cewivar00655579 | |||||
F45E10.1d.1:c.-122-719del | ||||||
F45E10.1a.1:c.281-719del | ||||||
F45E10.1b.1:c.281-719del | ||||||
F45E10.1h.1:c.281-719del | ||||||
F45E10.1g.1:c.281-719del | ||||||
F45E10.1c.1:c.281-719del | ||||||
HGVSg | CHROMOSOME_II:g.11074600del | |||||
Sequence_details | SMap | S_parent | Sequence | C09H10 | ||
Flanking_sequences | TGTGTTCTTTTTTCCACAAAAAAGTATCGCCTCTACACTGAATCGAAACC | TTTTTTGGTGTGGTTCTTTCGATTTGATTCGTTGACTATTAGTTCAGTTC | ||||
Mapping_target | C09H10 | |||||
Type_of_mutation | Deletion | T | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain (19) | ||||||
Laboratory | AX | |||||
Analysis | WGS_De_Bono | |||||
Million_mutation_project_reanalysis | ||||||
DB_info | Database | dbSNP_ss | ss | 539007104 | ||
Status | Live | |||||
Affects | Gene | WBGene00006788 | ||||
Transcript | F45E10.1c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | F45E10.1c.1:c.281-719del | |||||
Intron_number | 4/23 | |||||
F45E10.1b.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | F45E10.1b.1:c.281-719del | |||||
Intron_number | 4/22 | |||||
F45E10.1d.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | F45E10.1d.1:c.-122-719del | |||||
Intron_number | 1/20 | |||||
F45E10.1g.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | F45E10.1g.1:c.281-719del | |||||
Intron_number | 4/21 | |||||
F45E10.1a.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | F45E10.1a.1:c.281-719del | |||||
Intron_number | 5/23 | |||||
F45E10.1h.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | F45E10.1h.1:c.281-719del | |||||
Intron_number | 4/21 | |||||
Reference | WBPaper00037807 | |||||
Method | WGS_De_Bono |