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WormBase Tree Display for Variation: WBVar01238160

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Name Class

WBVar01238160EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar01238160
Other_namecewivar00012139
F53C3.13d.2:c.289-43T>A
F53C3.13e.1:c.289-43T>A
F53C3.13f.1:c.289-37T>A
F53C3.13c.1:c.289-43T>A
F53C3.13b.1:c.289-43T>A
F53C3.13a.1:c.289-43T>A
F53C3.13d.1:c.289-43T>A
HGVSgCHROMOSOME_II:g.3926122A>T
Sequence_detailsSMapS_parentSequenceY14H12B
Flanking_sequencesTTGCGTACCTGAAACTTTGGCAGAATTTGGATTAGCCATTAAAGGGGCGGGTCTAAATTTGAATTTGGGGGTTTTTTAAATTAAGGGTATGAGTCTAAAA
Mapping_targetY14H12B
Type_of_mutationSubstitutionaTPaper_evidenceWBPaper00037807
SeqStatusSequenced
Variation_typeSNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (13)
LaboratoryAX
AnalysisWGS_De_Bono
Million_mutation_project_reanalysis
DB_infoDatabasedbSNP_ssss539076288
HistoryAcquires_mergeWBVar01304468
StatusLive
AffectsGeneWBGene00018756
TranscriptF53C3.13e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53C3.13e.1:c.289-43T>A
Intron_number3/6
F53C3.13b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53C3.13b.1:c.289-43T>A
Intron_number3/6
F53C3.13d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53C3.13d.1:c.289-43T>A
Intron_number3/7
F53C3.13a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53C3.13a.1:c.289-43T>A
Intron_number3/6
F53C3.13d.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53C3.13d.2:c.289-43T>A
Intron_number3/6
F53C3.13f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53C3.13f.1:c.289-37T>A
Intron_number3/6
F53C3.13c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53C3.13c.1:c.289-43T>A
Intron_number3/6
ReferenceWBPaper00037807
MethodWGS_De_Bono