Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Variation: WBVar01238150

expand all nodes | collapse all nodes | view schema

Name Class

WBVar01238150EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar01238150
Other_namecewivar00012126
F53C3.13d.1:c.*36-319G>A
F53C3.13a.1:c.957-579G>A
F53C3.13f.1:c.963-1996G>A
F53C3.13e.1:c.957-1996G>A
F53C3.13d.2:c.*612G>A
F53C3.13c.1:c.957-319G>A
F53C3.13b.1:c.957-1430G>A
HGVSgCHROMOSOME_II:g.3922382C>T
Sequence_detailsSMapS_parentSequenceF53C3
Flanking_sequencesCAAAAAATAACCCAAATCCAGTTGAAATTTGAAAATTGACCGACATGTCAAGCGTCTGGAAACTTACTTTTTAAAGATCACCGTCTAATTTTGGTAATGC
Mapping_targetF53C3
Type_of_mutationSubstitutioncTPaper_evidenceWBPaper00037807
SeqStatusSequenced
Variation_typeSNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (13)
LaboratoryAX
AnalysisWGS_De_Bono
Million_mutation_project_reanalysis
DB_infoDatabasedbSNP_ssss539076279
HistoryAcquires_mergeWBVar01304460
StatusLive
AffectsGeneWBGene00018756
TranscriptF53C3.13e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53C3.13e.1:c.957-1996G>A
Intron_number5/6
F53C3.13b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53C3.13b.1:c.957-1430G>A
Intron_number5/6
F53C3.13d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53C3.13d.1:c.*36-319G>A
Intron_number7/7
F53C3.13a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53C3.13a.1:c.957-579G>A
Intron_number5/6
F53C3.13d.2VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScF53C3.13d.2:c.*612G>A
cDNA_position1812
Exon_number7/7
F53C3.13f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53C3.13f.1:c.963-1996G>A
Intron_number5/6
F53C3.13c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53C3.13c.1:c.957-319G>A
Intron_number5/6
ReferenceWBPaper00037807
MethodWGS_De_Bono