WormBase Tree Display for Variation: WBVar01232109
expand all nodes | collapse all nodes | view schema
WBVar01232109 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01232109 | |||||
Other_name | cewivar00385389 | ||||||
W09B6.1b.1:c.2201+1098A>T | |||||||
W09B6.1a.1:c.2690A>T | |||||||
W09B6.1a.4:c.2690A>T | |||||||
W09B6.1a.2:c.2690A>T | |||||||
W09B6.1a.3:c.2690A>T | |||||||
W09B6.1c.1:c.3023A>T | |||||||
CE46516:p.Lys1008Met | |||||||
CE14734:p.Lys897Met | |||||||
HGVSg | CHROMOSOME_II:g.1148664A>T | ||||||
Sequence_details | SMap | S_parent | Sequence | W09B6 | |||
Flanking_sequences | TATTGTGATGAAGGCGCTGCTGGGTGCACTGAAGCAAGGATCCGGATCGA | GTTTATCCCGTCGTTGTTGGATAATCTTCGACAGATTGGAAATCTCCATC | |||||
Mapping_target | W09B6 | ||||||
Type_of_mutation | Substitution | a | T | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00006642 | From_analysis | WGS_De_Bono | ||||
WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | AX | ||||||
Analysis | WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | |||||||
DB_info | Database | dbSNP_ss | ss | 539070841 | |||
Status | Live | ||||||
Affects | Gene | WBGene00004076 | |||||
Transcript | W09B6.1a.2 (12) | ||||||
W09B6.1c.1 (12) | |||||||
W09B6.1a.3 (12) | |||||||
W09B6.1a.1 (12) | |||||||
W09B6.1b.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | W09B6.1b.1:c.2201+1098A>T | ||||||
Intron_number | 4/5 | ||||||
W09B6.1a.4 (12) | |||||||
Reference | WBPaper00037807 | ||||||
Method | WGS_De_Bono |