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WormBase Tree Display for Variation: WBVar00603616

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Name Class

WBVar00603616NamePublic_nameWBVar00603616
Other_nameoicr_ce2035
cewivar00489065
CE27131:p.Ala288=
F17E5.1a.1:c.864G>A
HGVSgCHROMOSOME_X:g.12410057C>T
Sequence_detailsSMapS_parentSequenceF17E5
Flanking_sequencesTATTCCTACCTTCAATTTTCTTGATTCATTGTACCTTCGCATCTGATCAATGACGTCATTCATGTGTTTTCTGCTGCCATGTGTTCTTTATCTCTGATCCATTCATGGTTCAGAGCCTAAAAGTTGAATTGTTTCATTTTTCAATTTCAT
Mapping_targetF17E5
Type_of_mutationSubstitutionct
SeqStatusSequenced
Variation_typeSNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00022886From_analysisMillion_mutation_project_reanalysis
WBStrain00022887From_analysisMillion_mutation_project_reanalysis
WBStrain00023192From_analysisMillion_mutation_project_reanalysis
WBStrain00027649From_analysisWGS_Stein
AnalysisWGS_Stein
Million_mutation_project_reanalysis
DB_infoDatabasedbSNP_ssssss477720833
StatusLive
AffectsGeneWBGene00002991
TranscriptF17E5.1a.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScF17E5.1a.1:c.864G>A
HGVSpCE27131:p.Ala288=
cDNA_position880
CDS_position864
Protein_position288
Exon_number9/26
Codon_changegcG/gcA
Amino_acid_changeA
Remarkvalidatation rate is over 97%
MethodWGS_Stein