WormBase Tree Display for Variation: WBVar00601259
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WBVar00601259 | Evidence | Paper_evidence | WBPaper00038410 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | eq3 | |||||
Other_name | CE40563:p.Trp1064Ter | ||||||
F54D1.5.1:c.3191G>A | |||||||
HGVSg | CHROMOSOME_IV:g.11280214G>A | ||||||
Sequence_details | SMap | S_parent | Sequence | F54D1 | |||
Flanking_sequences | aagcattaactgaaccaaatgtaaaggatt | gcattggttacttgtcagaaatatcttcta | |||||
Mapping_target | F54D1 | ||||||
Type_of_mutation | Substitution | g | a | Paper_evidence | WBPaper00038410 | ||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Component_of_genotype | WBGenotype00000002 | ||||||
Laboratory | LH | ||||||
Status | Live | ||||||
Affects | Gene | WBGene00001796 | |||||
Transcript | F54D1.5.1 | VEP_consequence | stop_gained | ||||
VEP_impact | HIGH | ||||||
HGVSc | F54D1.5.1:c.3191G>A | ||||||
HGVSp | CE40563:p.Trp1064Ter | ||||||
cDNA_position | 3235 | ||||||
CDS_position | 3191 | ||||||
Protein_position | 1064 | ||||||
Exon_number | 17/28 | ||||||
Codon_change | tGg/tAg | ||||||
Amino_acid_change | W/* | ||||||
Interactor | WBInteraction000501207 | ||||||
WBInteraction000524604 | |||||||
Genetics | Interpolated_map_position | IV | 4.94097 | ||||
Reference | WBPaper00038410 | ||||||
Method | Substitution_allele |