WormBase Tree Display for Variation: WBVar00322002
expand all nodes | collapse all nodes | view schema
WBVar00322002 | Evidence | Paper_evidence | WBPaper00037659 | |||
---|---|---|---|---|---|---|
Name | Public_name | snx4430 | ||||
Other_name | IS659_1829 | |||||
CE02601:p.Phe16Leu | ||||||
F08F8.5.1:c.46T>C | ||||||
HGVSg | CHROMOSOME_III:g.7363419A>G | |||||
Sequence_details | SMap | S_parent | Sequence | F08F8 | ||
Flanking_sequences | TTGCAAATTGTAATATTCAATTGAAATTTGTTCAGTTGCTCCAGGAGCAA | ATAAAGTTTGAAAAGAATTGAATTGGTTGCAGTTGTAGTTTTCATTTTTC | ||||
Mapping_target | F08F8 | |||||
Type_of_mutation | Substitution | A | G | |||
SeqStatus | Sequenced | |||||
Variation_type | Allele | |||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00022165 | |||||
Laboratory | IS | |||||
Analysis | WGS_Jarriault | |||||
Status | Live | |||||
Affects | Gene | WBGene00017270 | ||||
Transcript | F08F8.5.1 | VEP_consequence | missense_variant | |||
VEP_impact | MODERATE | |||||
SIFT | 1 | tolerated_low_confidence | ||||
PolyPhen | 0.001 | benign | ||||
HGVSc | F08F8.5.1:c.46T>C | |||||
HGVSp | CE02601:p.Phe16Leu | |||||
cDNA_position | 46 | |||||
CDS_position | 46 | |||||
Protein_position | 16 | |||||
Exon_number | 1/1 | |||||
Codon_change | Ttt/Ctt | |||||
Amino_acid_change | F/L | |||||
Genetics | Map | III | ||||
Reference | WBPaper00037659 | |||||
Method | WGS_Jarriault |