WormBase Tree Display for Gene: WBGene00017270
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| WBGene00017270 | SMap | S_parent | Sequence | F08F8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | numr-1 | Person_evidence | WBPerson184 | |||||
| Sequence_name | F08F8.5 | ||||||||
| Molecular_name | F08F8.5 | ||||||||
| F08F8.5.1 | |||||||||
| CE02601 | |||||||||
| Other_name | CELE_F08F8.5 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | numr-1 | ||||||||
| DB_info | Database | AceView | gene | 3I452 | |||||
| WormQTL | gene | WBGene00017270 | |||||||
| WormFlux | gene | WBGene00017270 | |||||||
| NDB | locus_tag | CELE_F08F8.5 | |||||||
| NCBI | gene | 176048 | |||||||
| RefSeq | protein | NM_066226.1 | |||||||
| TrEMBL | UniProtAcc | Q19209 | |||||||
| UniProt_GCRP | UniProtAcc | Q19209 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 09 Feb 2007 15:51:46 | WBPerson2970 | Name_change | CGC_name | numr-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | numr | ||||||||
| Allele | WBVar01500260 | ||||||||
| WBVar00318304 | |||||||||
| WBVar00251611 | |||||||||
| WBVar01499774 | |||||||||
| WBVar00322002 | |||||||||
| WBVar00093403 | |||||||||
| Strain | WBStrain00032440 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (19) | |||||||||
| Paralog | WBGene00017267 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Expressed in egg-laying apparatus; intestine; neurons; and pharynx. Is predicted to encode a protein with the following domains: Uncharacterized strongylid L4 protein; Uncharacterized Strongylid L4 protein; and Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F08F8.5 | |||||||
| Corresponding_transcript | F08F8.5.1 | ||||||||
| Other_sequence | CRC04298_1 | ||||||||
| CR00657 | |||||||||
| Associated_feature | WBsf226968 | ||||||||
| WBsf226969 | |||||||||
| WBsf226970 | |||||||||
| Experimental_info | RNAi_result (11) | ||||||||
| Expr_pattern | Expr9049 | ||||||||
| Expr9112 | |||||||||
| Expr1025257 | |||||||||
| Expr1147996 | |||||||||
| Drives_construct | WBCnstr00008387 | ||||||||
| WBCnstr00008388 | |||||||||
| WBCnstr00008389 | |||||||||
| WBCnstr00008390 | |||||||||
| WBCnstr00027438 | |||||||||
| Construct_product | WBCnstr00008389 | ||||||||
| WBCnstr00008390 | |||||||||
| WBCnstr00027438 | |||||||||
| Regulate_expr_cluster | WBPaper00057068:numr-1(RNAi)_downregulated | ||||||||
| WBPaper00057068:numr-1(RNAi)_downregulated_Cadmium | |||||||||
| WBPaper00057068:numr-1(RNAi)_upregulated | |||||||||
| WBPaper00057068:numr-1(RNAi)_upregulated_Cadmium | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (184) | |||||||||
| Interaction (39) | |||||||||
| Map_info | Map | III | Position | -0.748785 | Error | 0.000193 | |||
| Positive | Positive_clone | F08F8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (13) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
