WormBase Tree Display for Variation: WBVar00317852
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| WBVar00317852 | Evidence | Paper_evidence | WBPaper00037659 | ||
|---|---|---|---|---|---|
| Name | Public_name | snx280 | |||
| Other_name | IS656_807 | ||||
| Y8A9A.2.1:c.1239C>T | |||||
| CE53975:p.Thr413= | |||||
| HGVSg | CHROMOSOME_II:g.3797066C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | Y8A9A | |
| Flanking_sequences | ACGACTGAGTCAACAACAGAATCAACTACGGAGTCTACCAGCACATCCAC | GATTCTACTACAACCGAGTCTACCACAGAATCAACTACGGAGTCTACCAGCACT | |||
| Mapping_target | Y8A9A | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | Allele | ||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00022163 | ||||
| Laboratory | IS | ||||
| Analysis | WGS_Jarriault | ||||
| Status | Live | ||||
| Affects | Gene | WBGene00021171 | |||
| Transcript | Y8A9A.2.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | Y8A9A.2.1:c.1239C>T | ||||
| HGVSp | CE53975:p.Thr413= | ||||
| cDNA_position | 1239 | ||||
| CDS_position | 1239 | ||||
| Protein_position | 413 | ||||
| Exon_number | 5/19 | ||||
| Codon_change | acC/acT | ||||
| Amino_acid_change | T | ||||
| Genetics | Map | II | |||
| Reference | WBPaper00037659 | ||||
| Method | WGS_Jarriault |
