WormBase Tree Display for Variation: WBVar00278100
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WBVar00278100 | Evidence | Paper_evidence | WBPaper00036200 | ||
---|---|---|---|---|---|
Name | Public_name | gk2521 | |||
Other_name | Y74E4A.1a.1:c.1174-147G>A | ||||
Y74E4A.1b.1:c.1174-138G>A | |||||
HGVSg | CHROMOSOME_II:g.4652915G>A | ||||
Sequence_details | SMap | S_parent | Sequence | T05A7 | |
Flanking_sequences | TTAAATTTTTTTGATAGATACCTTTGGTAG | ATATGTATATGGAAATACCAAAACCCCATA | |||
Mapping_target | T05A7 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00037340 | ||||
Laboratory | VC | ||||
Person | WBPerson427 | ||||
Analysis | Million_Mutation_Pilot_Project | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00022283 | |||
Transcript | Y74E4A.1b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y74E4A.1b.1:c.1174-138G>A | ||||
Intron_number | 9/10 | ||||
Y74E4A.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y74E4A.1a.1:c.1174-147G>A | ||||
Intron_number | 9/10 | ||||
Isolation | Mutagen | ENU | |||
Reference | WBPaper00036200 | ||||
Remark | Allele identified through whole-genome sequencing by the Gene Knockout Consortium | Paper_evidence | WBPaper00036200 | ||
Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | |||
Method | KO_consortium_allele |