WormBase Tree Display for Variation: WBVar00276389
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WBVar00276389 | Evidence | Paper_evidence | WBPaper00036200 | ||
---|---|---|---|---|---|
Name | Public_name | gk2324 | |||
Other_name | F22D3.2c.1:c.306+124G>A | ||||
F22D3.2j.1:c.1281+124G>A | |||||
F22D3.2d.1:c.1278+124G>A | |||||
F22D3.2i.1:c.201+124G>A | |||||
F22D3.2g.1:c.1290+124G>A | |||||
F22D3.2e.1:c.1269+124G>A | |||||
HGVSg | CHROMOSOME_II:g.6944972G>A | ||||
Sequence_details | SMap | S_parent | Sequence | F22D3 | |
Flanking_sequences | GTATCGTTAACGCGCATTTCTGATCATCTTATCAAATCGCACTTGCCCAC | AAAAATCGTATCAATACCGTATCCCGGTTATTTCGTCCAAAAAGCATACA | |||
Mapping_target | F22D3 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00037339 | ||||
Laboratory | VC | ||||
Person | WBPerson427 | ||||
Analysis | Million_Mutation_Pilot_Project | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00017699 | |||
Transcript | F22D3.2g.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F22D3.2g.1:c.1290+124G>A | ||||
Intron_number | 15/18 | ||||
F22D3.2e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F22D3.2e.1:c.1269+124G>A | ||||
Intron_number | 15/18 | ||||
F22D3.2c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F22D3.2c.1:c.306+124G>A | ||||
Intron_number | 3/6 | ||||
F22D3.2i.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F22D3.2i.1:c.201+124G>A | ||||
Intron_number | 2/4 | ||||
F22D3.2d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F22D3.2d.1:c.1278+124G>A | ||||
Intron_number | 15/18 | ||||
F22D3.2j.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F22D3.2j.1:c.1281+124G>A | ||||
Intron_number | 15/18 | ||||
Isolation | Mutagen | ENU | |||
Reference | WBPaper00036200 | ||||
Remark | Allele identified through whole-genome sequencing by the Gene Knockout Consortium | Paper_evidence | WBPaper00036200 | ||
Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | |||
Method | KO_consortium_allele |