WormBase Tree Display for Variation: WBVar00275496
expand all nodes | collapse all nodes | view schema
| WBVar00275496 | Evidence | Paper_evidence | WBPaper00005082 | ||
|---|---|---|---|---|---|
| Name | Public_name | zu147 | |||
| Other_name | VF36H2L.1.1:c.826C>T | ||||
| CE16526:p.Arg276Ter | |||||
| HGVSg | CHROMOSOME_I:g.9232343G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | VF36H2L | |
| Flanking_sequences | ataacggatgcagtcactttaaaacaagtg | gaacattaattgaagaacgaaaattgagga | |||
| Mapping_target | VF36H2L | ||||
| Type_of_mutation | Substitution | c | t | ||
| SeqStatus | Sequenced | ||||
| Variation_type | Allele | ||||
| Origin | Species | Caenorhabditis elegans | |||
| Laboratory | JJ | ||||
| Status | Live | ||||
| Affects | Gene | WBGene00000147 | |||
| Transcript | VF36H2L.1.1 | VEP_consequence | stop_gained | ||
| VEP_impact | HIGH | ||||
| HGVSc | VF36H2L.1.1:c.826C>T | ||||
| HGVSp | CE16526:p.Arg276Ter | ||||
| cDNA_position | 829 | ||||
| CDS_position | 826 | ||||
| Protein_position | 276 | ||||
| Exon_number | 5/6 | ||||
| Codon_change | Cga/Tga | ||||
| Amino_acid_change | R/* | ||||
| Interactor | WBInteraction000521730 | ||||
| WBInteraction000521733 | |||||
| WBInteraction000521897 | |||||
| WBInteraction000521898 | |||||
| WBInteraction000521916 | |||||
| WBInteraction000521917 | |||||
| WBInteraction000521918 | |||||
| WBInteraction000524376 | |||||
| Genetics | Interpolated_map_position | I | 3.67828 | ||
| Description | Phenotype (4) | ||||
| Reference | WBPaper00040544 | ||||
| WBPaper00005082 | |||||
| WBPaper00026132 | |||||
| Method | Substitution_allele |
