WormBase Tree Display for Variation: WBVar00275299
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WBVar00275299 | Evidence | Paper_evidence | WBPaper00006355 | ||
---|---|---|---|---|---|
Name | Public_name | y47 | |||
Other_name | CE26205:p.Gln1396Ter | ||||
Y59A8B.1a.1:c.4186C>T | |||||
HGVSg | CHROMOSOME_V:g.17939620G>A | ||||
Sequence_details | SMap | S_parent | Sequence | Y59A8B | |
Flanking_sequences | attatgccgtggggtgatttttcggaagtt | agggtataaaagaggacacttcggacgatg | |||
Mapping_target | Y59A8B | ||||
Type_of_mutation | Substitution | c | t | ||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00035092 | ||||
Laboratory | TY | ||||
Status | Live | ||||
Affects | Gene | WBGene00001080 | |||
Transcript | Y59A8B.1a.1 | VEP_consequence | stop_gained | ||
VEP_impact | HIGH | ||||
HGVSc | Y59A8B.1a.1:c.4186C>T | ||||
HGVSp | CE26205:p.Gln1396Ter | ||||
cDNA_position | 4351 | ||||
CDS_position | 4186 | ||||
Protein_position | 1396 | ||||
Exon_number | 9/13 | ||||
Codon_change | Cag/Tag | ||||
Amino_acid_change | Q/* | ||||
Interactor | WBInteraction000052067 | ||||
WBInteraction000052434 | |||||
Genetics | Interpolated_map_position | V | 13.3321 | ||
Mapping_data | In_pos_neg_data | 4305 | |||
Description | Phenotype (7) | ||||
Phenotype_not_observed | WBPhenotype:0000065 | Paper_evidence | WBPaper00001077 | ||
Curator_confirmed | WBPerson712 | ||||
Reference | WBPaper00013841 | ||||
WBPaper00001077 | |||||
WBPaper00001011 | |||||
Method | Substitution_allele |