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WormBase Tree Display for Variation: WBVar00275213

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Name Class

WBVar00275213NamePublic_namex18
Other_nameY110A7A.3.1:c.110-1G>A
HGVSgCHROMOSOME_I:g.5142174G>A
Sequence_detailsSMapS_parentSequenceY110A7A
Flanking_sequencestcgccaaaaagaaaaactaaaaatatttcaattacaataaactggtgcgaccggtcagtg
Mapping_targetY110A7A
Type_of_mutationSubstitutionga
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00040032
WBStrain00040929
LaboratoryZZ
StatusLive
AffectsGeneWBGene00006797
TranscriptY110A7A.3.1VEP_consequencesplice_acceptor_variant
VEP_impactHIGH
HGVScY110A7A.3.1:c.110-1G>A
Intron_number2/11
IsolationMutagenEMSPaper_evidenceWBPaper00024268
GeneticsInterpolated_map_positionI-0.357566
Mapping_dataIn_2_point245
246
In_multi_point238
973
991
2093
DescriptionPhenotypeWBPhenotype:0000017Paper_evidenceWBPaper00000484
Curator_confirmedWBPerson2021
RecessivePaper_evidenceWBPaper00000484
Curator_confirmedWBPerson2021
Affected_byMoleculeWBMol:00003650Paper_evidenceWBPaper00000484
Curator_confirmedWBPerson2021
Phenotype_assayTreatment2mM aldicarbPaper_evidenceWBPaper00000484
Curator_confirmedWBPerson2021
WBPhenotype:0000421Paper_evidenceWBPaper00000484
Curator_confirmedWBPerson2021
RecessivePaper_evidenceWBPaper00000484
Curator_confirmedWBPerson2021
Affected_byMoleculeWBMol:00004019Paper_evidenceWBPaper00000484
Curator_confirmedWBPerson2021
Phenotype_assayTreatment1mM levamisolePaper_evidenceWBPaper00000484
Curator_confirmedWBPerson2021
WBPhenotype:0000643Paper_evidenceWBPaper00000484
Curator_confirmedWBPerson2021
RemarkNo backward motion in L1 larvae. Newly hatched larvae can barely move forward. Adults have a mild Unc defect where the mutants move forward in a slow decayed sine wave.Paper_evidenceWBPaper00000484
Curator_confirmedWBPerson2021
RecessivePaper_evidenceWBPaper00000484
Curator_confirmedWBPerson2021
EQ_annotationsLife_stageWBls:0000024PATO:0000460Paper_evidenceWBPaper00000484
Curator_confirmedWBPerson2021
WBls:0000041PATO:0000460Paper_evidenceWBPaper00000484
Curator_confirmedWBPerson2021
WBPhenotype:0001289Paper_evidenceWBPaper00000484
Curator_confirmedWBPerson2021
RemarkAnimals are resistant to the acetylcholinesterase inhibitors trichlorfon and eserine.Paper_evidenceWBPaper00000484
Curator_confirmedWBPerson2021
RecessivePaper_evidenceWBPaper00000484
Curator_confirmedWBPerson2021
Phenotype_assayTreatment1mM trichlorfon. 1mM eserinePaper_evidenceWBPaper00000484
Curator_confirmedWBPerson2021
WBPhenotype:0001578Paper_evidenceWBPaper00000484
Curator_confirmedWBPerson2021
RemarkAnimals are resistant to the cholinergic agonist carbachol.Paper_evidenceWBPaper00000484
Curator_confirmedWBPerson2021
RecessivePaper_evidenceWBPaper00000484
Curator_confirmedWBPerson2021
Phenotype_assayTreatment1mM carbacholPaper_evidenceWBPaper00000484
Curator_confirmedWBPerson2021
Phenotype_not_observedWBPhenotype:0000315Paper_evidenceWBPaper00000484
Curator_confirmedWBPerson2021
RecessivePaper_evidenceWBPaper00000484
Curator_confirmedWBPerson2021
WBPhenotype:0000478Paper_evidenceWBPaper00000484
Curator_confirmedWBPerson2021
RemarkMutants tend to remain within the borders of bacterial lawns as does the wild-type.Paper_evidenceWBPaper00000484
Curator_confirmedWBPerson2021
RecessivePaper_evidenceWBPaper00000484
Curator_confirmedWBPerson2021
WBPhenotype:0001084Paper_evidenceWBPaper00000484
Curator_confirmedWBPerson2021
RemarkAttraction to sodium chloride is normal (See methods).Paper_evidenceWBPaper00000484
Curator_confirmedWBPerson2021
RecessivePaper_evidenceWBPaper00000484
Curator_confirmedWBPerson2021
WBPhenotype:0001414Paper_evidenceWBPaper00000484
Curator_confirmedWBPerson2021
RecessivePaper_evidenceWBPaper00000484
Curator_confirmedWBPerson2021
ReferenceWBPaper00000484
WBPaper00018321
MethodSubstitution_allele