WormBase Tree Display for Variation: WBVar00274818

WBVar00274818 Evidence: Paper_evidence: WBPaper00005369
  Name: Public_name: WBVar00274818
    Other_name: uCE6-1555
      H13N06.6c.1:c.*63del
      H13N06.6b.1:c.*63del
      H13N06.6a.1:c.*63del
    HGVSg: CHROMOSOME_X:g.15500291del
  Sequence_details: SMap: S_parent: Sequence: H13N06
    Flanking_sequences: TGTCTTGCCCCTACCCCCGTTTGATTTAATTGCAACAAGTTACGAAGTTTTTAGATCAACTGTGATAGTATGAATAAATGTTTTATGACAAAATATTTTT AAAGGTTTAATTACGAATGATGTAGGAAAGGACAATGGCACGTTGAAAGTTACACAATACTATTACTCAAAATTAATCATGTCATTGATGGCTGGACACT
    Mapping_target: H13N06
    Type_of_mutation: Deletion: T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Swan
    Analysis: SNP_Swan
    Status: Live
  Affects: Gene: WBGene00006541
    Transcript: H13N06.6c.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: H13N06.6c.1:c.*63del
        cDNA_position: 1984
        Exon_number: 12/12
      H13N06.6a.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: H13N06.6a.1:c.*63del
        cDNA_position: 1834
        Exon_number: 10/10
      H13N06.6b.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: H13N06.6b.1:c.*63del
        cDNA_position: 2037
        Exon_number: 10/10
  Reference: WBPaper00005369
  Method: SNP_Swan