WormBase Tree Display for Variation: WBVar00274474
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WBVar00274474 | Evidence | Paper_evidence | WBPaper00005369 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00274474 | |||
Other_name | uCE6-1158 | ||||
F46F6.1a.3:c.642A>G | |||||
CE53372:p.Gly214= | |||||
F46F6.1b.1:c.642A>G | |||||
F46F6.1a.2:c.642A>G | |||||
F46F6.1a.1:c.642A>G | |||||
CE18697:p.Gly214= | |||||
HGVSg | CHROMOSOME_X:g.10376375T>C | ||||
Sequence_details | SMap | S_parent | Sequence | Y49A10A | |
Flanking_sequences | ACCAATATTTATGTAAACATTTTTGTTAGAAATTTTATATTACTCACCAACACATTGGGTAGAGAAGCATCGAGACCGCATGGAGACATGAACTCAACGA | CCAACTTTCCGCCCAGTAAACAGAATACGACGTTCTTTCAGTAGACTTGCAAAGATTGCTAACATCTGCCGAGGGTCGATGGCGTTGTAGAACTCGAGGA | |||
Mapping_target | Y49A10A | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Swan | ||
Analysis | SNP_Swan | ||||
Status | Live | ||||
Affects | Gene | WBGene00004375 | |||
Transcript | F46F6.1a.3 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | F46F6.1a.3:c.642A>G | ||||
HGVSp | CE18697:p.Gly214= | ||||
cDNA_position | 785 | ||||
CDS_position | 642 | ||||
Protein_position | 214 | ||||
Exon_number | 7/15 | ||||
Codon_change | ggA/ggG | ||||
Amino_acid_change | G | ||||
F46F6.1a.2 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | F46F6.1a.2:c.642A>G | ||||
HGVSp | CE18697:p.Gly214= | ||||
cDNA_position | 992 | ||||
CDS_position | 642 | ||||
Protein_position | 214 | ||||
Exon_number | 8/16 | ||||
Codon_change | ggA/ggG | ||||
Amino_acid_change | G | ||||
F46F6.1a.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | F46F6.1a.1:c.642A>G | ||||
HGVSp | CE18697:p.Gly214= | ||||
cDNA_position | 694 | ||||
CDS_position | 642 | ||||
Protein_position | 214 | ||||
Exon_number | 6/14 | ||||
Codon_change | ggA/ggG | ||||
Amino_acid_change | G | ||||
F46F6.1b.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | F46F6.1b.1:c.642A>G | ||||
HGVSp | CE53372:p.Gly214= | ||||
cDNA_position | 801 | ||||
CDS_position | 642 | ||||
Protein_position | 214 | ||||
Exon_number | 6/14 | ||||
Codon_change | ggA/ggG | ||||
Amino_acid_change | G | ||||
Reference | WBPaper00005369 | ||||
Method | SNP_Swan |