WormBase Tree Display for Variation: WBVar00271412
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| WBVar00271412 | Evidence | Paper_evidence | WBPaper00005369 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00271412 | |||
| Other_name | uCE5-692 | ||||
| Y50D4B.2a.1:c.-707C>T | |||||
| Y50D4B.2b.1:c.113C>T | |||||
| CE50927:p.Ala38Val | |||||
| HGVSg | CHROMOSOME_V:g.1101300C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | Y50D4B | |
| Flanking_sequences | TTTGATGTGGTTGTCTATGGAGCAACTGGTTTCACTGGTACATTTATTGTTGAACGTATGATAAAATCACAGTTTTTCGATGATTTATCAATTGCGGTTG | TGGAAGGAATGAGAAGAAGCTCAGAGAGGTGTTGAGAATTGTTGGAGAGAAAACTGGTACGCTTAAATATTTTTTTTTCTGAATATTACCAATTTTTAAA | |||
| Mapping_target | Y50D4B | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | SNP_Swan | ||
| Analysis | SNP_Swan | ||||
| Status | Live | ||||
| Affects | Gene | WBGene00021741 | |||
| Transcript | Y50D4B.2a.1 | VEP_consequence | 5_prime_UTR_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y50D4B.2a.1:c.-707C>T | ||||
| cDNA_position | 721 | ||||
| Exon_number | 1/5 | ||||
| Y50D4B.2b.1 (12) | |||||
| Reference | WBPaper00005369 | ||||
| Method | SNP_Swan |
