WormBase Tree Display for Variation: WBVar00271120
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WBVar00271120 | Evidence | Paper_evidence | WBPaper00005369 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00271120 | |||
Other_name | uCE4-1527 | ||||
cewivar00216663 | |||||
Y105C5B.1420:n.141-3286A>C | |||||
HGVSg | CHROMOSOME_IV:g.16161170T>G | ||||
Sequence_details | SMap | S_parent | Sequence | Y105C5B | |
Flanking_sequences | AGTGAGTATGTTCAAATCCTATTGGAAAGAAATCAAACGAAACACCGGCAACCGATCCACACAAATCACGATCCAATAAAGAAAGGAGACATTGGCATGT | CAAGGATGAGAATCGGAAAATTGATTGGCCACTGGCTCGCGTTGAAGAAGTTGGGCTCCGAGCAGTACAACTATTCTGCCCAAAAACCAAGAGAACAGTG | |||
Mapping_target | Y105C5B | ||||
Type_of_mutation | Substitution | T | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | |||
Analysis | SNP_Swan | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00220260 | |||
Transcript | Y105C5B.1420 | VEP_consequence | intron_variant,non_coding_transcript_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y105C5B.1420:n.141-3286A>C | ||||
Intron_number | 1/2 | ||||
Reference | WBPaper00005369 | ||||
Method | SNP_Swan |