WormBase Tree Display for Variation: WBVar00271114
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WBVar00271114 | Evidence | Paper_evidence | WBPaper00005369 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00271114 | |||
Other_name | uCE4-1521 | ||||
cewivar00695436 | |||||
Y105C5B.21a.1:c.800-519_800-518insAA | |||||
Y105C5B.21g.1:c.290-519_290-518insAA | |||||
Y105C5B.21f.1:c.581-519_581-518insAA | |||||
Y105C5B.21e.1:c.800-519_800-518insAA | |||||
Y105C5B.21c.1:c.581-519_581-518insAA | |||||
Y105C5B.21b.1:c.290-519_290-518insAA | |||||
HGVSg | CHROMOSOME_IV:g.16006568_16006569insTT | ||||
Sequence_details | SMap | S_parent | Sequence | Y105C5B | |
Flanking_sequences | GAACAAGATGGGTAAAAGATAACGGGGAAAGGGACAGTGGAAAGGTCAGATTTGATGGGACATGACAGGATGAGAGTTCGACAGTTTTGTGAGGGGAAAAG | GGTGAGAATTGCTGGAAGTCAGACGATTGGTAATATAGTAACTTTGGAAAAAAGGAAAAAGTGAAATAGATACTGTGAAACTGTAATTTTTTTTCCAAAA | |||
Mapping_target | Y105C5B | ||||
Type_of_mutation | Insertion | TT | |||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (12) | |||||
Analysis | SNP_Swan | ||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01969470 | |||
Status | Live | ||||
Affects | Gene | WBGene00002175 | |||
Transcript | Y105C5B.21g.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y105C5B.21g.1:c.290-519_290-518insAA | ||||
Intron_number | 2/10 | ||||
Y105C5B.21e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y105C5B.21e.1:c.800-519_800-518insAA | ||||
Intron_number | 5/14 | ||||
Y105C5B.21f.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y105C5B.21f.1:c.581-519_581-518insAA | ||||
Intron_number | 3/11 | ||||
Y105C5B.21c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y105C5B.21c.1:c.581-519_581-518insAA | ||||
Intron_number | 3/11 | ||||
Y105C5B.21b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y105C5B.21b.1:c.290-519_290-518insAA | ||||
Intron_number | 2/10 | ||||
Y105C5B.21a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y105C5B.21a.1:c.800-519_800-518insAA | ||||
Intron_number | 5/14 | ||||
Reference | WBPaper00005369 | ||||
Method | SNP_Swan |