WormBase Tree Display for Variation: WBVar00270357

WBVar00270357 Name: Public_name: WBVar00270357
    Other_name: uCE4-667
      haw150136
      cewivar00202794
      C45G7.13.1:c.-5-115A>G
      C45G7.5.1:c.3940-3215A>G
      C45G7.13.3:c.-120A>G
      C45G7.13.2:c.-5-115A>G
    HGVSg: CHROMOSOME_IV:g.2444460T>C
  Sequence_details: SMap: S_parent: Sequence: C45G7
    Flanking_sequences: CCGTTACATATTGGAATTGAAGAAAAGGTGTGAAAACTGCAGAGTGGGGGTTAGAGGTGGTAGTGTGATGGCCTAGAAAACTACATTGTGAAACTTCTAG CCGTAAATTTAAATATCTTAAAGAGCTAGCGTTAAGCTATTCAGAACAATTTTGAAAATTTAAACATCTCAATTTTAAGGCAAGTTATGACGGATTGAAG
    Mapping_target: C45G7
    Type_of_mutation: Substitution: T C
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Swan
          WGS_Yanai
          Million_mutation_project_reanalysis
    Person: WBPerson4037
    Analysis: SNP_Swan
      WGS_Yanai
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar00570001
    Status: Live
  Affects: Gene: WBGene00000402
      WBGene00235340
    Transcript: C45G7.13.3 VEP_consequence: 5_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: C45G7.13.3:c.-120A>G
        cDNA_position: 268
        Exon_number: 1/5
      C45G7.5.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C45G7.5.1:c.3940-3215A>G
        Intron_number: 13/19
      C45G7.13.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C45G7.13.2:c.-5-115A>G
        Intron_number: 1/5
      C45G7.13.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C45G7.13.1:c.-5-115A>G
        Intron_number: 1/5
  Reference: WBPaper00038208
    WBPaper00005369
  Method: SNP_Swan