WormBase Tree Display for Variation: WBVar00269597
expand all nodes | collapse all nodes | view schema
WBVar00269597 | Evidence | Paper_evidence | WBPaper00005369 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00269597 | |||
Other_name | uCE3-737 | ||||
Y39A3CL.1b.1:c.1374+951del | |||||
Y39A3CL.1a.1:c.1375-9del | |||||
HGVSg | CHROMOSOME_III:g.1842861del | ||||
Sequence_details | SMap | S_parent | Sequence | Y39A3CL | |
Flanking_sequences | AAAATGTTCAGTTTTAATCAATTTTTCGCCGGTTTTCGATGTTTTTTTGACGATTTTTAGTGTTAAAATCGAATTCTCCACTATTTGTCACCTTTTTTTT | CGTCACAGATCTGGTTCCACTGTACGTCTGCTCGGGGCTCCGACCAACTTCCATATCTCCTGAAAACTCAACAATTCGGATTAGTTCAAACGCCGAAATC | |||
Mapping_target | Y39A3CL | ||||
Type_of_mutation | Deletion | T | |||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Swan | ||
Analysis | SNP_Swan | ||||
Status | Live | ||||
Affects | Gene | WBGene00021440 | |||
Transcript | Y39A3CL.1b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y39A3CL.1b.1:c.1374+951del | ||||
Intron_number | 9/11 | ||||
Y39A3CL.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y39A3CL.1a.1:c.1375-9del | ||||
Intron_number | 9/12 | ||||
Reference | WBPaper00005369 | ||||
Method | SNP_Swan |