WormBase Tree Display for Variation: WBVar00269320
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| WBVar00269320 | Name | Public_name | WBVar00269320 | ||
|---|---|---|---|---|---|
| Other_name | uCE2-2313 | ||||
| haw136908 | |||||
| cewivar00144433 | |||||
| R06A4.9c.1:c.72A>G | |||||
| CE21113:p.Ser24= | |||||
| R06A4.9a.1:c.72A>G | |||||
| CE53932:p.Ser24= | |||||
| HGVSg | CHROMOSOME_II:g.14358558A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | R06A4 | |
| Flanking_sequences | AAATTTAAATTTTATCGGCGTCTTTCAACATGAACGGTGGAATGATGCGTGGCAATCAGATGCCGAATGTTACTCTAACAATTCAACCATCTACATCGTC | ATGCAGAATTCTCAGCCGAGAATTATGAACAATCACCACCATCCGCATAATCGATTTCAAAGAGAACATGTGATGCCAGACGTGATGGGTGATGGTCCTG | |||
| Mapping_target | R06A4 | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | ||
| WGS_Andersen | |||||
| WBStrain00004602 | From_analysis | SNP_Swan | |||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| WBStrain00031279 | From_analysis | WGS_Andersen | |||
| WBStrain00031284 | From_analysis | WGS_Andersen | |||
| Laboratory | AX | ||||
| Person | WBPerson4037 | ||||
| Analysis | SNP_Swan | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01442224 | |||
| WBVar01384386 | |||||
| WBVar00556773 | |||||
| WBVar01442225 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00011051 | |||
| Transcript | R06A4.9a.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | R06A4.9a.1:c.72A>G | ||||
| HGVSp | CE21113:p.Ser24= | ||||
| cDNA_position | 193 | ||||
| CDS_position | 72 | ||||
| Protein_position | 24 | ||||
| Exon_number | 2/9 | ||||
| Codon_change | tcA/tcG | ||||
| Amino_acid_change | S | ||||
| R06A4.9c.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | R06A4.9c.1:c.72A>G | ||||
| HGVSp | CE53932:p.Ser24= | ||||
| cDNA_position | 193 | ||||
| CDS_position | 72 | ||||
| Protein_position | 24 | ||||
| Exon_number | 2/8 | ||||
| Codon_change | tcA/tcG | ||||
| Amino_acid_change | S | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| WBPaper00005369 | |||||
| Method | SNP_Swan |
