WormBase Tree Display for Gene: WBGene00011051
expand all nodes | collapse all nodes | view schema
| WBGene00011051 | SMap | S_parent | Sequence | R06A4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | pfs-2 | Person_evidence | WBPerson5509 | |||||
| Sequence_name | R06A4.9 | ||||||||
| Molecular_name | R06A4.9a | ||||||||
| R06A4.9a.1 | |||||||||
| CE21113 | |||||||||
| R06A4.9b | |||||||||
| CE48640 | |||||||||
| R06A4.9c | |||||||||
| CE53932 | |||||||||
| R06A4.9b.1 | |||||||||
| R06A4.9c.1 | |||||||||
| Other_name | CELE_R06A4.9 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | pfs-2 | ||||||||
| DB_info | Database | AceView | gene | 2O647 | |||||
| WormQTL | gene | WBGene00011051 | |||||||
| SignaLink | protein | WBGene00011051 | |||||||
| WormFlux | gene | WBGene00011051 | |||||||
| NDB | locus_tag | CELE_R06A4.9 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00011051|UniProtKB=U4PCM1 | |||||||
| family | PTHR22836 | ||||||||
| NCBI | gene | 175092 | |||||||
| RefSeq | protein | NM_001393232.1 | |||||||
| NM_001381653.1 | |||||||||
| NM_001393231.1 | |||||||||
| SwissProt | UniProtAcc | U4PCM1 | |||||||
| UniProt_GCRP | UniProtAcc | U4PCM1 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 10 Nov 2008 17:10:59 | WBPerson2970 | Name_change | CGC_name | pfs-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pfs | ||||||||
| Allele (56) | |||||||||
| Strain | WBStrain00037726 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00105029 | ||||||||
| 00105030 | |||||||||
| 00105031 | |||||||||
| 00105032 | |||||||||
| 00105033 | |||||||||
| 00105034 | |||||||||
| 00105035 | |||||||||
| 00118350 | |||||||||
| Contained_in_operon | CEOP2640 | ||||||||
| Ortholog (39) | |||||||||
| Structured_description | Automated_description | Predicted to be involved in mRNA polyadenylation. Located in nuclear speck. Is an ortholog of human WDR33 (WD repeat domain 33). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R06A4.9a | |||||||
| R06A4.9b | |||||||||
| R06A4.9c | |||||||||
| Corresponding_CDS_history | R06A4.9:wp239 | ||||||||
| R06A4.9a:wp274 | |||||||||
| Corresponding_transcript | R06A4.9a.1 | ||||||||
| R06A4.9b.1 | |||||||||
| R06A4.9c.1 | |||||||||
| Other_sequence (54) | |||||||||
| Associated_feature | WBsf644843 | ||||||||
| WBsf990685 | |||||||||
| WBsf990686 | |||||||||
| WBsf1013829 | |||||||||
| WBsf1013830 | |||||||||
| WBsf222448 | |||||||||
| WBsf222449 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00034648 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00095691 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00066808 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00051366 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00106639 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1015899 | ||||||||
| Expr1034850 | |||||||||
| Expr1155054 | |||||||||
| Expr2014854 | |||||||||
| Expr2033089 | |||||||||
| Drives_construct | WBCnstr00007006 | ||||||||
| WBCnstr00007007 | |||||||||
| WBCnstr00007008 | |||||||||
| WBCnstr00007009 | |||||||||
| WBCnstr00007010 | |||||||||
| WBCnstr00007012 | |||||||||
| WBCnstr00007367 | |||||||||
| WBCnstr00030966 | |||||||||
| Construct_product | WBCnstr00007006 | ||||||||
| WBCnstr00007007 | |||||||||
| WBCnstr00007008 | |||||||||
| WBCnstr00007009 | |||||||||
| WBCnstr00007010 | |||||||||
| WBCnstr00007012 | |||||||||
| WBCnstr00030966 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (68) | |||||||||
| Interaction (45) | |||||||||
| Map_info | Map | II | Position | 22.917 | Error | 0.002306 | |||
| Positive | Positive_clone | R06A4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00036363 | ||||||||
| WBPaper00037341 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00047180 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00058884 | |||||||||
| WBPaper00059048 | |||||||||
| WBPaper00064651 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
