WormBase Tree Display for Variation: WBVar00269190

WBVar00269190 Evidence: Paper_evidence: WBPaper00005369
  Name: Public_name: WBVar00269190
    Other_name: uCE2-2165
      Y38F1A.10c.1:c.584-12del
      Y38F1A.10e.1:c.593-12del
      Y38F1A.10f.1:c.593-12del
      Y38F1A.10a.1:c.584-12del
    HGVSg: CHROMOSOME_II:g.13023869del
  Sequence_details: SMap: S_parent: Sequence: Y38F1A
    Flanking_sequences: CGGAAGAACTGGCGGTTGAGGCGGGAACGGAGATCGTGGATGCAGTTTTGGAGTCTCTCCGGTGAATGTTTTCAGTTGTGGAGCACTTTCTGAAAAAAAA TCGAATTATTGCAAAGATTTATGTGTATGTTCACTTACCACTATATGGAACTGGAGCTGGAGACGGAACGTTATTCCTTTCCGATAATGAGAGAGATGTG
    Mapping_target: Y38F1A
    Type_of_mutation: Deletion: A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Swan
    Analysis: SNP_Swan
    Status: Live
  Affects: Gene: WBGene00305704
      WBGene00003144
    Transcript: Y38F1A.10f.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y38F1A.10f.1:c.593-12del
        Intron_number: 5/10
      Y38F1A.10a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y38F1A.10a.1:c.584-12del
        Intron_number: 6/12
      Y38F1A.10c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y38F1A.10c.1:c.584-12del
        Intron_number: 6/13
      Y38F1A.14
      Y38F1A.10e.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y38F1A.10e.1:c.593-12del
        Intron_number: 6/13
  Reference: WBPaper00005369
  Method: SNP_Swan