WormBase Tree Display for Variation: WBVar00267655
expand all nodes | collapse all nodes | view schema
WBVar00267655 | Evidence | Paper_evidence | WBPaper00005369 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00267655 | |||
Other_name | uCE1-1556 | ||||
Y105E8A.26a.1:c.151-849del | |||||
Y105E8A.26c.1:c.55-849del | |||||
Y105E8A.26b.1:c.151-849del | |||||
HGVSg | CHROMOSOME_I:g.14535103del | ||||
Sequence_details | SMap | S_parent | Sequence | Y105E8A | |
Flanking_sequences | ACGTTTTTTTTTTGTTATAGACGCTACTAGTTTAGTTTTGCCTCTGGAGTTTTTAAACCAAGATAATATGTTTTTTCCATTTTCGCAAAATCTCCATTTT | GCAATAATTGCATACTTACTTACAAAAAGTATATAGGCTCTTTTTGTTTCAATTAACCACAATTGTATTATCTAAAAAATATCATCTAAAAATTATTTTT | |||
Mapping_target | Y105E8A | ||||
Type_of_mutation | Deletion | T | |||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Swan | ||
Analysis | SNP_Swan | ||||
Status | Live | ||||
Affects | Gene | WBGene00013683 | |||
Transcript | Y105E8A.26b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y105E8A.26b.1:c.151-849del | ||||
Intron_number | 3/13 | ||||
Y105E8A.26a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y105E8A.26a.1:c.151-849del | ||||
Intron_number | 3/14 | ||||
Y105E8A.26c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y105E8A.26c.1:c.55-849del | ||||
Intron_number | 1/12 | ||||
Reference | WBPaper00005369 | ||||
Method | SNP_Swan |