WormBase Tree Display for Variation: WBVar00267032
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WBVar00267032 | Name | Public_name | WBVar00267032 | ||
---|---|---|---|---|---|
Other_name | uCE1-865 | ||||
haw117064 | |||||
cewivar00165930 | |||||
F54C1.3a.1:c.52+108A>G | |||||
F54C1.3b.1:c.52+108A>G | |||||
F54C1.3a.2:c.52+108A>G | |||||
HGVSg | CHROMOSOME_I:g.4997003A>G | ||||
Sequence_details | SMap | S_parent | Sequence | F54C1 | |
Flanking_sequences | GGAGAATAGGACATTTACTGGAATTTACAAAAATCAAATTCTTAAAATCAATTTTTAATTAATTTTGAAACATAAATCCCAATCGCGCCGAGACCCGCGT | TTCTAACACAACGCTCACCTTTAAAAATAGTTAATTTTTTATTCGAGAAACTCGGCCTGAAACTTTTTATTTAACTTCTTGTTTAAATTGTAATTTAAAC | |||
Mapping_target | F54C1 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Swan | ||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | AX | ||||
Person | WBPerson4037 | ||||
Analysis | SNP_Swan | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01344196 | |||
WBVar00536929 | |||||
Status | Live | ||||
Affects | Gene | WBGene00003221 | |||
Transcript | F54C1.3a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F54C1.3a.1:c.52+108A>G | ||||
Intron_number | 2/16 | ||||
F54C1.3b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F54C1.3b.1:c.52+108A>G | ||||
Intron_number | 2/15 | ||||
F54C1.3a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F54C1.3a.2:c.52+108A>G | ||||
Intron_number | 2/17 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
WBPaper00005369 | |||||
Method | SNP_Swan |