Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Variation: WBVar00267032

expand all nodes | collapse all nodes | view schema

Name Class

WBVar00267032NamePublic_nameWBVar00267032
Other_nameuCE1-865
haw117064
cewivar00165930
F54C1.3a.1:c.52+108A>G
F54C1.3b.1:c.52+108A>G
F54C1.3a.2:c.52+108A>G
HGVSgCHROMOSOME_I:g.4997003A>G
Sequence_detailsSMapS_parentSequenceF54C1
Flanking_sequencesGGAGAATAGGACATTTACTGGAATTTACAAAAATCAAATTCTTAAAATCAATTTTTAATTAATTTTGAAACATAAATCCCAATCGCGCCGAGACCCGCGTTTCTAACACAACGCTCACCTTTAAAAATAGTTAATTTTTTATTCGAGAAACTCGGCCTGAAACTTTTTATTTAACTTCTTGTTTAAATTGTAATTTAAAC
Mapping_targetF54C1
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Swan
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
WBStrain00031113From_analysisMillion_mutation_project_reanalysis
LaboratoryAX
PersonWBPerson4037
AnalysisSNP_Swan
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01344196
WBVar00536929
StatusLive
AffectsGeneWBGene00003221
TranscriptF54C1.3a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF54C1.3a.1:c.52+108A>G
Intron_number2/16
F54C1.3b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF54C1.3b.1:c.52+108A>G
Intron_number2/15
F54C1.3a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF54C1.3a.2:c.52+108A>G
Intron_number2/17
ReferenceWBPaper00038208
WBPaper00037807
WBPaper00005369
MethodSNP_Swan