WormBase Tree Display for Variation: WBVar00266852
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| WBVar00266852 | Name | Public_name | WBVar00266852 | ||
|---|---|---|---|---|---|
| Other_name | uCE1-657 | ||||
| cewivar00163032 | |||||
| Y23H5B.6c.1:c.244-430G>A | |||||
| Y23H5B.6b.1:c.361-430G>A | |||||
| Y23H5B.6a.1:c.1606-430G>A | |||||
| HGVSg | CHROMOSOME_I:g.2496238G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | Y23H5B | |
| Flanking_sequences | ATTTTGCAACCGTGTGACACTGTTTTTTTTCCCGATATAAACCAAGTAAAATCGAAACTTTATTGAGTAAAATCCTCGAAAAAAACCGTGCCGCAGGGCT | CGAAATTACGCTCCGCCTCTTTTTCTATACGACGCTGCTGGGAGATTGGCCACGCCCATAAAACCGTGCGGAAAAAAACCAAAATTTGCTACCCCCGCAC | |||
| Mapping_target | Y23H5B | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | SNP_Swan | ||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | AX | ||||
| Analysis | SNP_Swan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01336127 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00021277 | |||
| Transcript | Y23H5B.6b.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y23H5B.6b.1:c.361-430G>A | ||||
| Intron_number | 1/1 | ||||
| Y23H5B.6c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y23H5B.6c.1:c.244-430G>A | ||||
| Intron_number | 1/1 | ||||
| Y23H5B.6a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y23H5B.6a.1:c.1606-430G>A | ||||
| Intron_number | 5/6 | ||||
| Reference | WBPaper00037807 | ||||
| WBPaper00005369 | |||||
| Method | SNP_Swan |
