WormBase Tree Display for Variation: WBVar00252831
expand all nodes | collapse all nodes | view schema
WBVar00252831 | Name | Public_name | tm4326 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | CE42001:p.Ser229_Thr374delextTer? | |||||||
F25D7.5.1:c.683_1120del | ||||||||
HGVSg | CHROMOSOME_I:g.10427552_10428130del | |||||||
Sequence_details | SMap | S_parent | Sequence | Y106G6H | ||||
Flanking_sequences | atgacaaagatgaacttattttagaagtag | atctacaatttcagagatttaatttctgga | ||||||
Mapping_target | Y106G6H | |||||||
Source_location | 7 | CHROMOSOME_I | 10427551 | 10428131 | Inferred_automatically | National_Bioresource_Project | ||
Type_of_mutation | Deletion | |||||||
PCR_product | tm4326_external | |||||||
tm4326_internal | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Allele | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Laboratory | FX | |||||||
Author | Mitani S | |||||||
DB_info | Database | National_Bioresource_Project | seq | 4326 | ||||
NBP_allele | ||||||||
Status | Live | |||||||
Affects | Gene | WBGene00009114 | ||||||
Transcript | F25D7.5.1 (11) | |||||||
Isolation | Mutagen | TMP/UV | ||||||
Genetics | Map | I | ||||||
Description | Phenotype_not_observed | WBPhenotype:0000062 | Person_evidence | WBPerson7743 | ||||
Curator_confirmed | WBPerson712 | |||||||
Remark | Reclassified as homozygous viable by the National Bioresource Project of Japan; originally classified as lethal OR sterile. | Person_evidence | WBPerson7743 | |||||
Curator_confirmed | WBPerson712 | |||||||
Reference | WBPaper00049001 | |||||||
Remark | [Y106G6H] 394/395-[Y106G6H] 973/974 (579 bp deletion) | |||||||
This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. | Paper_evidence | WBPaper00041807 | ||||||
Method | NBP_knockout_allele |