WormBase Tree Display for Variation: WBVar00252370

WBVar00252370 Name: Public_name: tm3762
    Other_name: ZK270.1.2:c.85+29_785del
      ZK270.1.1:c.85+29_785del
    HGVSg: CHROMOSOME_I:g.14909390_14910214del
  Sequence_details: SMap: S_parent: Sequence: ZK270
    Flanking_sequences: aggtaagatttatcgaaatcatttagattt caagcctggatggaccgaagcacaggtgaa
    Mapping_target: ZK270
    Source_location: 7 CHROMOSOME_I 14909389 14910215 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm3762_external
      tm3762_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 3762
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00004237
    Transcript: ZK270.1.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: ZK270.1.1:c.85+29_785del
        cDNA_position: ?-822
        CDS_position: ?-785
        Protein_position: ?-262
        Intron_number: 2-4/13
        Exon_number: 3-5/14
      ZK270.1.2 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: ZK270.1.2:c.85+29_785del
        cDNA_position: ?-947
        CDS_position: ?-785
        Protein_position: ?-262
        Intron_number: 3-5/14
        Exon_number: 4-6/15
  Isolation: Mutagen: TMP/UV
  Genetics: Map: I
  Description: Phenotype_not_observed: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as homozygous viable by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
  Remark: 28778/28779-29603/29604 (825 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele