WormBase Tree Display for Variation: WBVar00251563

WBVar00251563 Name: Public_name: tm2718
    Other_name: Y54E10A.2.1:c.1565+2350_1565+2784del
      Y54E10A.16.1:c.636_1023del
      CE24445:p.Ile212MetfsTer48
    HGVSg: CHROMOSOME_I:g.3244834_3245268del
  Sequence_details: SMap: S_parent: Sequence: Y54E10A
    Flanking_sequences: ctgttggccgaatcgctccatgaatgagtc atgaagaatttgttgagcggcattcgggaa
    Mapping_target: Y54E10A
    Source_location: 7 CHROMOSOME_I 3244833 3245269 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm2718_external
      tm2718_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 2718
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00021834
      WBGene00003258
    Transcript: Y54E10A.2.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y54E10A.2.1:c.1565+2350_1565+2784del
        Intron_number: 9/15
      Y54E10A.16.1 (11)
  Isolation: Mutagen: TMP/UV
  Genetics: Map: I
  Description: Phenotype: WBPhenotype:0000154 Paper_evidence: WBPaper00036735
        Curator_confirmed: WBPerson712
      WBPhenotype:0000296 Paper_evidence: WBPaper00036735
        Curator_confirmed: WBPerson712
      WBPhenotype:0000297 Paper_evidence: WBPaper00036735
        Curator_confirmed: WBPerson712
        Remark: Animals exhibit fusions of rays 4-5 (17%), rays 6-7 (60%) and rays 8-9(31%). Although structural processes were fused, neuronal processes were well separated. Paper_evidence: WBPaper00036735
            Curator_confirmed: WBPerson712
        Penetrance: Incomplete: Paper_evidence: WBPaper00036735
              Curator_confirmed: WBPerson712
        Variation_effect: Null: Paper_evidence: WBPaper00036735
            Curator_confirmed: WBPerson712
      WBPhenotype:0001005 Paper_evidence: WBPaper00036735
        Curator_confirmed: WBPerson712
        Remark: In response to anterior touch, backward movement of males is uncoordinated. Paper_evidence: WBPaper00036735
            Curator_confirmed: WBPerson712
      WBPhenotype:0001414 Paper_evidence: WBPaper00036735
        Curator_confirmed: WBPerson712
    Phenotype_not_observed: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as homozygous viable by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
      WBPhenotype:0000229 Paper_evidence: WBPaper00036735
        Curator_confirmed: WBPerson712
  Reference: WBPaper00036735
  Remark (2)
  Method: NBP_knockout_allele