WormBase Tree Display for Variation: WBVar00251487

WBVar00251487 Name: Public_name: tm2634
    Other_name: F55G1.15.1:c.1086+135_1130del
    HGVSg: CHROMOSOME_IV:g.7499342_7499532del
  Sequence_details: SMap: S_parent: Sequence: F55G1
    Flanking_sequences: atatctcctcttgcatgtgccttatgatga ccaatgtgtgtgtgtgtgtgttttctttag
    Mapping_target: F55G1
    Source_location: 7 CHROMOSOME_IV 7499341 7499533 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm2634_external
      tm2634_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 2634
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00006967
      WBGene00201427
      WBGene00018907
    Transcript: F55G1.16
      F55G1.15.1 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F55G1.15.1:c.1086+135_1130del
        cDNA_position: ?-1302
        CDS_position: ?-1130
        Protein_position: ?-377
        Intron_number: 7/13
        Exon_number: 8/14
      F55G1.20 VEP_consequence: non_coding_transcript_exon_variant
        VEP_impact: MODIFIER
        cDNA_position: 112-?
        Exon_number: 1/1
  Isolation: Mutagen: TMP/UV
  Genetics: Map: IV
  Description: Phenotype_not_observed: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson48
        Remark: Classified as 'homozygous viable' by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson48
            Laboratory_evidence: FX
  Remark: 35167/35168-35358/35359 (191 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele