WormBase Tree Display for Variation: WBVar00248992

WBVar00248992 Name: Public_name: sy436
    Other_name: CE38270:p.Trp643Ter
      CE08039:p.Trp676Ter
      C09E10.2a.1:c.2021G>A
      C09E10.2c.1:c.1553G>A
      C09E10.2b.1:c.2027G>A
      CE38269:p.Trp520Ter
      C09E10.2d.1:c.1559G>A
      C09E10.2e.1:c.1928G>A
      CE08038:p.Trp674Ter
      CE38268:p.Trp518Ter
    HGVSg: CHROMOSOME_X:g.986362C>T
  Sequence_details: SMap: S_parent: Sequence: C09E10
    Flanking_sequences: ttgaagccgacactgtgaaactagacagat ggctgtagtgttccatgaagaagagagaaa
    Mapping_target: C09E10
    Type_of_mutation: Substitution: g a Paper_evidence: WBPaper00024616
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: PS
    Status: Live
  Affects: Gene: WBGene00000958
    Transcript: C09E10.2d.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: C09E10.2d.1:c.1559G>A
        HGVSp: CE38269:p.Trp520Ter
        cDNA_position: 1559
        CDS_position: 1559
        Protein_position: 520
        Exon_number: 9/14
        Codon_change: tGg/tAg
        Amino_acid_change: W/*
      C09E10.2c.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: C09E10.2c.1:c.1553G>A
        HGVSp: CE38268:p.Trp518Ter
        cDNA_position: 1553
        CDS_position: 1553
        Protein_position: 518
        Exon_number: 9/14
        Codon_change: tGg/tAg
        Amino_acid_change: W/*
      C09E10.2a.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: C09E10.2a.1:c.2021G>A
        HGVSp: CE08038:p.Trp674Ter
        cDNA_position: 2164
        CDS_position: 2021
        Protein_position: 674
        Exon_number: 12/18
        Codon_change: tGg/tAg
        Amino_acid_change: W/*
      C09E10.2e.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: C09E10.2e.1:c.1928G>A
        HGVSp: CE38270:p.Trp643Ter
        cDNA_position: 1928
        CDS_position: 1928
        Protein_position: 643
        Exon_number: 10/15
        Codon_change: tGg/tAg
        Amino_acid_change: W/*
      C09E10.2b.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: C09E10.2b.1:c.2027G>A
        HGVSp: CE08039:p.Trp676Ter
        cDNA_position: 2170
        CDS_position: 2027
        Protein_position: 676
        Exon_number: 12/18
        Codon_change: tGg/tAg
        Amino_acid_change: W/*
  Genetics: Interpolated_map_position: X -18.8717
  Method: Substitution_allele