WormBase Tree Display for Variation: WBVar00248992
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WBVar00248992 | Name (3) | ||||||
---|---|---|---|---|---|---|---|
Sequence_details | SMap | S_parent | Sequence | C09E10 | |||
Flanking_sequences | ttgaagccgacactgtgaaactagacagat | ggctgtagtgttccatgaagaagagagaaa | |||||
Mapping_target | C09E10 | ||||||
Type_of_mutation | Substitution | g | a | Paper_evidence | WBPaper00024616 | ||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Laboratory | PS | ||||||
Status | Live | ||||||
Affects | Gene | WBGene00000958 | |||||
Transcript | C09E10.2d.1 | VEP_consequence | stop_gained | ||||
VEP_impact | HIGH | ||||||
HGVSc | C09E10.2d.1:c.1559G>A | ||||||
HGVSp | CE38269:p.Trp520Ter | ||||||
cDNA_position | 1559 | ||||||
CDS_position | 1559 | ||||||
Protein_position | 520 | ||||||
Exon_number | 9/14 | ||||||
Codon_change | tGg/tAg | ||||||
Amino_acid_change | W/* | ||||||
C09E10.2c.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | ||||||
HGVSc | C09E10.2c.1:c.1553G>A | ||||||
HGVSp | CE38268:p.Trp518Ter | ||||||
cDNA_position | 1553 | ||||||
CDS_position | 1553 | ||||||
Protein_position | 518 | ||||||
Exon_number | 9/14 | ||||||
Codon_change | tGg/tAg | ||||||
Amino_acid_change | W/* | ||||||
C09E10.2a.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | ||||||
HGVSc | C09E10.2a.1:c.2021G>A | ||||||
HGVSp | CE08038:p.Trp674Ter | ||||||
cDNA_position | 2164 | ||||||
CDS_position | 2021 | ||||||
Protein_position | 674 | ||||||
Exon_number | 12/18 | ||||||
Codon_change | tGg/tAg | ||||||
Amino_acid_change | W/* | ||||||
C09E10.2e.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | ||||||
HGVSc | C09E10.2e.1:c.1928G>A | ||||||
HGVSp | CE38270:p.Trp643Ter | ||||||
cDNA_position | 1928 | ||||||
CDS_position | 1928 | ||||||
Protein_position | 643 | ||||||
Exon_number | 10/15 | ||||||
Codon_change | tGg/tAg | ||||||
Amino_acid_change | W/* | ||||||
C09E10.2b.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | ||||||
HGVSc | C09E10.2b.1:c.2027G>A | ||||||
HGVSp | CE08039:p.Trp676Ter | ||||||
cDNA_position | 2170 | ||||||
CDS_position | 2027 | ||||||
Protein_position | 676 | ||||||
Exon_number | 12/18 | ||||||
Codon_change | tGg/tAg | ||||||
Amino_acid_change | W/* | ||||||
Genetics | Interpolated_map_position | X | -18.8717 | ||||
Method | Substitution_allele |