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WormBase Tree Display for Variation: WBVar00248657

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Name Class

WBVar00248657EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00248657
Other_namesnp_ZK1010[3]
ZK1010.t1.1:n.61A>G
ZK1010.9.1:c.1159-34A>G
HGVSgCHROMOSOME_III:g.13009483A>G
Sequence_detailsSMapS_parentSequenceF14F7
Flanking_sequencestaatccattggggtttccccgcgtcaatctcatcctgatcgaacattttt
Mapping_targetF14F7
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
RFLP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Wicks
AnalysisSNP_Wicks
StatusLive
AffectsGeneWBGene00004906
WBGene00014639
TranscriptZK1010.9.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScZK1010.9.1:c.1159-34A>G
Intron_number4/9
ZK1010.t1VEP_consequencenon_coding_transcript_exon_variant
VEP_impactMODIFIER
HGVScZK1010.t1.1:n.61A>G
cDNA_position61
Exon_number1/1
ReferenceWBPaper00004703
RemarkPredicted SNP: Psnp=0.9328 VarS=AG
Enzymes. SNP detectable only by sequencing.
[20040130 db] this Locus was previously named snp_ZK1010.3
[20040130 db] this Allele was previously named snp_ZK1010.3
[20090224 db] original Wicks name : ZK1010:32985..33611@487 Psnp=0.9328 VarS=AG
[20090224 db] original Wicks id : yx32b12.s1@426,g,47
[20090224 db] Snip-SNP
MethodSNP_Wicks